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3 Chapter 10Table 10.1 Performance comparison table for the different SVM methods.Table 10.2 Sequential chunking using different DNA hairpin datasets.Table 10.3 Multi‐threaded chunking using different DNA hairpin datasetsTable 10.4 Sequential chunking with the Absdiff kernel.Table 10.5 Multi‐threaded chunking with the Absdiff kernel.Table 10.6 Performance comparison of the different SVM methods.
4 Chapter 14Table 14.1 Comparative analysis of the translocation/dwell‐time (T/TD) and n...Table 14.2 Sensitivity limits for detection in the streptavidin‐biosensor mo...
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4 Chapter 4ssss1ssss1ssss1ssss1ssss1ssss1ssss1ssss1Figure 4.9 Prokaryotic gene structure discovered thus far.Figure 4.10 Two types of “stop” codon.Figure 4.11 Hypothesized splice signal upstream.Figure 4.12 Hypothesized splice signal downstream of stop upstream from true...
5 Chapter 6Figure 6.1 The most common stochastic sequential analysis flow topology. The...Figure 6.2 Graphical model for a first‐order Markov model.Figure 6.3 Graphical model for a standard hidden Markov model.Figure 6.4 The most probable state sequence.Figure 6.5 Viterbi path. Optimal path identification.Figure 6.6 Comparison of standard HMM and the clique‐generalized HMM. The up...Figure 6.7 HMM/EM Viterbi‐path level occupation feature extraction. Strong E...Figure 6.8 The binary classification performance using features extracted wi...Figure 6.9 Adaboost feature selection strengthens the SVM performance of the...Figure 6.10 If Adaboost operates from the 150 component manual set, a reduce...Figure 6.11 AdaBoosting to select 100 of the full set of 2600 features impro...